BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E06SP1|AL427774
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1575 1789 0.0
>3x_Contig1575
Length = 11952
Score = 1789 bits (901), Expect = 0.0
Identities = 909/911 (99%), Gaps = 1/911 (0%)
Strand = Plus / Minus
Query: 1 tagcggctggataagcatcgaaaactttttcaagagctttttctggctcttccaaaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9685 tagcggctggataagcatcgaaaactttttcaagagctttttctggctcttccaaaacag 9626
Query: 61 cgaaattttgaatgatagacacagtcttttgctttgtgaaacgttcctcaacacgacgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9625 cgaaattttgaatgatagacacagtcttttgctttgtgaaacgttcctcaacacgacgta 9566
Query: 121 agawttcaccagtgaaatttcttaaggtaaagtcaatccaactgttagtggatctgatat 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9565 agaattcaccagtgaaatttcttaaggtaaagtcaatccaactgttagtggatctgatat 9506
Query: 181 acatcaactcaaccattctcttagcgacttcttcgtaggtcatatcagccaaatcacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505 acatcaactcaaccattctcttagcgacttcttcgtaggtcatatcagccaaatcacgag 9446
Query: 241 cttctccgttgacggtggcaaaccatggcttttggtagtcggcattcaatttggaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9445 cttctccgttgacggtggcaaaccatggcttttggtagtcggcattcaatttggaaatga 9386
Query: 301 tgtaatccttcttagcatccaatgcggcttgtagtttattctttggcaaagagaaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9385 tgtaatccttcttagcatccaatgcggcttgtagtttattctttggcaaagagaaaatgg 9326
Query: 361 tgtcgtccatttccttccatagcataacaccacgagtagccaatttgtgaataggttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9325 tgtcgtccatttccttccatagcataacaccacgagtagccaatttgtgaataggttctc 9266
Query: 421 ccatttcggaacgaacagttatgataccgccggttggctttttgtatgtttgttcccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9265 ccatttcggaacgaacagttatgataccgccggttggctttttgtatgtttgttcccatt 9206
Query: 481 gggagtctggaacaccagagcactcagcaatcg-ttttctttgttgctggggaggtttta 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9205 gggagtctggaacaccagagcactcagcaatcgattttctttgttgctggggaggtttta 9146
Query: 540 gtttccttagcaatcataactctagaaccgaacaagaaaccgtcgaatggcattggtggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9145 gtttccttagcaatcataactctagaaccgaacaagaaaccgtcgaatggcattggtggg 9086
Query: 600 tagttgaactttgtggaccactcaccagttaaatatggataggtatcttcggctgacccg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9085 tagttgaactttgtggaccactcaccagttaaatatggataggtatcttcggctgacccg 9026
Query: 660 aaaccggaaccagcaatcaagtagatatttgaatgtcttctgatttttgcatacatttgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9025 aaaccggaaccagcaatcaagtagatatttgaatgtcttctgatttttgcatacatttgc 8966
Query: 720 aaaattggagcgtggaagtcttcaaatgaatggtgaccaccacctctaccaccagtccat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8965 aaaattggagcgtggaagtcttcaaatgaatggtgaccaccacctctaccaccagtccat 8906
Query: 780 tgcataacgattgggaaggttgggtgggctttggcaatagcaataacttgggaaatggcg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8905 tgcataacgattgggaaggttgggtgggctttggcaatagcaataacttgggaaatggcg 8846
Query: 840 tcaatggaacctggcttcaaacccaagtgtgtcaaacctagggtttcaatgtattcagta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8845 tcaatggaacctggcttcaaacccaagtgtgtcaaacctagggtttcaatgtattcagta 8786
Query: 900 gcgacgtctat 910
|||||||||||
Sbjct: 8785 gcgacgtctat 8775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6541
Number of Sequences: 1807
Number of extensions: 6541
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)